C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB39B, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033545 Rab39b-001 ENSMUSG00000031202 10090 - X:75572046-75578231 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033545
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033545 0.213±0.18 0.374±0.21 0.187±0.03 4.289±1.31 0.149±0.11 0.326±0.11 0.033±0.01 0.177±0.06 0.021±0.01 0.193±0.02 0.022±0.01 0.767±0.39 0.114±0.10 0.055±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003LK CIL_0003LK_0002 CGP X:75514299-75578231

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005525 IEA GTP binding
GO:0005794 IDA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016192 IMP vesicle-mediated transport
GO:0031489 IEA myosin V binding
GO:0031982 IEA vesicle
GO:0043005 IEA neuron projection
GO:0050808 IMP synapse organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369454 RAB39B-001 protein_coding Homo_sapiens 0 1541

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