C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S6 kinase polypeptide 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033671 Rps6ka3-001 ENSMUSG00000031309 10090 + X:159255858-159368244 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033671
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033671 16.202±0.64 0.989±0.18 5.025±3.09 4.762±2.68 2.171±0.00 6.075±1.03 1.549±0.89 0.961±0.30 2.588±2.01 1.175±0.03 3.410±2.12 3.150±2.97 2.600±1.53 0.479±0.19

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0002224 IMP toll-like receptor signaling pathway
GO:0004674 IDA protein serine/threonine kinase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006468 IEA:IDA protein phosphorylation
GO:0006950 IEA response to stress
GO:0007049 IEA cell cycle
GO:0019901 IPI protein kinase binding
GO:0032496 IMP response to lipopolysaccharide
GO:0035556 IEA intracellular signal transduction
GO:0043027 IEA cysteine-type endopeptidase inhibitor activity involved in apoptotic process
GO:0043154 IEA negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000044378 rps6ka1-001 protein_coding Danio_rerio 0 660
ENSDART00000129273 rps6ka1-004 protein_coding Danio_rerio 0 660
ENST00000379565 RPS6KA3-001 protein_coding Homo_sapiens 0 4608
ENST00000438357 RPS6KA3-003 protein_coding Homo_sapiens 0 678
ENST00000457145 RPS6KA3-002 protein_coding Homo_sapiens 0 985
ENST00000474266 RPS6KA3-004 retained_intron Homo_sapiens 0 335
ENST00000479809 RPS6KA3-005 processed_transcript Homo_sapiens 0 719
ENST00000492128 RPS6KA3-006 processed_transcript Homo_sapiens 0 811

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