C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, CCHC domain containing 18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033804 Zcchc18-003 ENSMUSG00000031428 10090 + X:136993298-136998472 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033804
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033804 0.034±0.03 4.964±0.51 0.050±0.03 0.062±0.00 0.007±0.00 0.021±0.01 0.020±0.00 0.041±0.00 0.022±0.01 0.191±0.08 0.033±0.01 0.083±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000721 CIL_000721_0002 CGP X:136974022-137038302
CIL_00012D CIL_00012D_0002 CGP X:136981116-137038302
CIL_000531 CIL_000531_0002 CGP X:136993155-137082503

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0008270 IEA zinc ion binding
GO:0016607 IBA nuclear speck
GO:0030374 IBA ligand-dependent nuclear receptor transcription coactivator activity
GO:0030509 IBA BMP signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000537356 ZCCHC18-006 protein_coding Homo_sapiens 0 815
ENST00000611638 ZCCHC18-201 protein_coding Homo_sapiens 0 815

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