C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: growth factor receptor bound protein 2-associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034150 Gab1-201 ENSMUSG00000031714 10090 - 8:80764434-80880479 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034150
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034150 11.409±1.39 6.917±0.38 11.506±0.62 7.632±3.24 12.236±2.40 9.322±0.52 8.933±2.48 12.348±1.78 3.065±1.48 22.262±2.48 3.461±0.63 15.604±3.12 5.425±2.44 3.034±1.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KM CIL_0008KM_0002 VISTA 8:80201065-80801915

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000187 IDA activation of MAPK activity
GO:0004871 IDA signal transducer activity
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0006979 IDA response to oxidative stress
GO:0007165 IDA signal transduction
GO:0007173 IMP epidermal growth factor receptor signaling pathway
GO:0007257 IMP activation of JUN kinase activity
GO:0007507 IMP heart development
GO:0008544 IMP epidermis development
GO:0030334 IGI regulation of cell migration
GO:0043410 IMP positive regulation of MAPK cascade
GO:0048008 IMP platelet-derived growth factor receptor signaling pathway
GO:0060711 IMP labyrinthine layer development
GO:0070102 IMP interleukin-6-mediated signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262994 GAB1-002 protein_coding Homo_sapiens 0 2065
ENST00000262995 GAB1-001 protein_coding Homo_sapiens 0 1592
ENST00000505913 GAB1-003 protein_coding Homo_sapiens 0 2021
ENST00000507070 GAB1-010 retained_intron Homo_sapiens 0 466
ENST00000508833 GAB1-013 processed_transcript Homo_sapiens 0 285
ENST00000510615 GAB1-011 retained_intron Homo_sapiens 0 521

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