C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: increased sodium tolerance 1 homolog (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034164 Ist1-201 ENSMUSG00000031729 10090 - 8:109671322-109693294 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034164
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034164 27.053±2.43 19.852±1.08 28.107±2.80 33.657±9.46 25.298±7.35 31.228±7.96 11.234±1.11 27.300±1.06 14.183±1.52 25.413±1.24 10.672±2.09 28.785±8.06 44.701±8.56 14.488±3.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098B CIL_00098B_0002 VISTA 8:109116597-109718209
CIL_00098E CIL_00098E_0002 VISTA 8:109136455-109737561
CIL_000564 CIL_000564_0002 CGP 8:109671322-109724932

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000910 IEA cytokinesis
GO:0005515 IPI protein binding
GO:0005793 IEA endoplasmic reticulum-Golgi intermediate compartment
GO:0005813 IEA centrosome
GO:0005829 IEA cytosol
GO:0008104 IEA protein localization
GO:0009838 IEA abscission
GO:0019076 IEA viral release from host cell
GO:0019904 IEA protein domain specific binding
GO:0030496 IEA midbody
GO:0031410 IEA cytoplasmic vesicle
GO:0032403 IEA protein complex binding
GO:0045184 IEA establishment of protein localization
GO:0045862 IEA positive regulation of proteolysis
GO:0046745 IEA viral capsid secondary envelopment
GO:0048672 IGI positive regulation of collateral sprouting
GO:0051301 IEA cell division
GO:0070062 IEA extracellular vesicular exosome
GO:0090541 IEA MIT domain binding
GO:0090543 IEA Flemming body

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000329908 IST1-002 protein_coding Homo_sapiens 0 1480
ENST00000378798 IST1-010 protein_coding Homo_sapiens 0 974
ENST00000378799 IST1-001 protein_coding Homo_sapiens 0 1517
ENST00000424485 IST1-019 protein_coding Homo_sapiens 0 549
ENST00000439924 IST1-011 nonsense_mediated_decay Homo_sapiens 0 676
ENST00000456820 IST1-012 protein_coding Homo_sapiens 0 857
ENST00000534994 IST1-016 protein_coding Homo_sapiens 0 856
ENST00000535424 IST1-201 protein_coding Homo_sapiens 0 1500
ENST00000536027 IST1-025 nonsense_mediated_decay Homo_sapiens 0 405
ENST00000537571 IST1-022 retained_intron Homo_sapiens 0 564
ENST00000537613 IST1-018 protein_coding Homo_sapiens 0 974
ENST00000538565 IST1-008 processed_transcript Homo_sapiens 0 845
ENST00000538709 IST1-024 retained_intron Homo_sapiens 0 250
ENST00000538850 IST1-009 protein_coding Homo_sapiens 0 998
ENST00000539186 IST1-017 protein_coding Homo_sapiens 0 693
ENST00000541180 IST1-006 retained_intron Homo_sapiens 0 309
ENST00000541571 IST1-004 protein_coding Homo_sapiens 0 1491
ENST00000541918 IST1-015 protein_coding Homo_sapiens 0 976
ENST00000544564 IST1-003 protein_coding Homo_sapiens 0 1430
ENST00000545388 IST1-023 retained_intron Homo_sapiens 0 368
ENST00000545518 IST1-021 retained_intron Homo_sapiens 0 577
ENST00000566536 IST1-020 retained_intron Homo_sapiens 0 634
ENST00000568581 IST1-026 protein_coding Homo_sapiens 0 448
ENST00000587765 CTD-2554C21.1-001 transcribed_processed_pseudogene Homo_sapiens 0 1323
ENST00000606369 IST1-202 protein_coding Homo_sapiens 0 845

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