C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coactosin-like 1 (Dictyostelium)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034285 Cotl1-201 ENSMUSG00000031827 10090 - 8:119809225-119840579 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034285
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034285 46.780±12.28 45.724±8.46 30.935±5.77 55.864±43.68 134.184±80.92 60.925±2.73 6.987±2.21 159.014±22.04 25.013±17.47 56.057±3.37 3.208±3.06 64.466±29.74 61.571±45.08 6.523±3.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002K5 CIL_0002K5_0002 CGP 8:119760587-119840579
CIL_0002K4 CIL_0002K4_0002 CGP 8:119809225-119876988

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IDA actin binding
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0016020 IEA membrane
GO:0019899 IPI enzyme binding
GO:0050832 IDA defense response to fungus
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262428 COTL1-001 protein_coding Homo_sapiens 0 521
ENST00000564662 COTL1-005 retained_intron Homo_sapiens 0 263
ENST00000567786 COTL1-007 protein_coding Homo_sapiens 9e-16 88

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