C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ras-related associated with diabetes
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034351 Rrad-201 ENSMUSG00000031880 10090 - 8:104628066-104631321 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034351
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034351 8.314±0.47 2.190±1.30 6.170±1.19 1.185±0.20 4.815±2.14 4.048±0.43 113.734±11.98 6.102±0.84 0.261±0.15 7.203±2.04 2.882±1.56 9.539±2.71 1.358±0.49 0.238±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WN CIL_0007WN_0002 VISTA 8:104309522-104912018
CIL_0003LX CIL_0003LX_0003 CGP 8:104614141-104631321
CIL_0003LW CIL_0003LW_0003 CGP 8:104628066-104641965

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005525 IEA GTP binding
GO:0006184 IEA GTP catabolic process
GO:0007264 IEA small GTPase mediated signal transduction
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000299759 RRAD-001 protein_coding Homo_sapiens 0 1014
ENST00000420652 RRAD-201 protein_coding Homo_sapiens 0 1014
ENST00000567791 RRAD-002 retained_intron Homo_sapiens 0 453

Loading