C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003LX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000077570-ENSDARG00000052011 CGP 7955 7:45848461-45951101
GeneTranscriptPositionBiotype
ENSDARG00000052011 (rrad)
Ras-related associated with diabetes 		ENSDART00000073735 (rrad-001) 45948135-45951101 protein_coding
ENSDARG00000077570 (CDH16)
cadherin 16, KSP-cadherin 		ENSDART00000109534 (CDH16-201) 45848461-45945450 protein_coding
ENSDARG00000090959 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000122315 (5S_rRNA.1890-201) 45894246-45894360 rRNA
CIL_0003LX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166589-ENSG00000166592 CGP 9606 16:66908122-66925644
GeneTranscriptPositionBiotype
ENSG00000166589 (CDH16)
cadherin 16, KSP-cadherin 		ENST00000299752 (CDH16-001) 66908122-66918984 protein_coding
ENST00000394055 (CDH16-002) 66908122-66918917 protein_coding
ENST00000565235 (CDH16-008) 66915220-66918847 protein_coding
ENST00000565796 (CDH16-006) 66908129-66918848 protein_coding
ENST00000567009 (CDH16-009) 66913185-66916396 protein_coding
ENST00000567269 (CDH16-003) 66908129-66918884 nonsense_mediated_decay
ENST00000568632 (CDH16-004) 66908123-66918848 protein_coding
ENST00000568698 (CDH16-005) 66908133-66918852 nonsense_mediated_decay
ENST00000570262 (CDH16-007) 66908124-66918876 protein_coding
ENSG00000166592 (RRAD)
Ras-related associated with diabetes 		ENST00000299759 (RRAD-001) 66921685-66925644 protein_coding
ENST00000420652 (RRAD-201) 66921679-66925536 protein_coding
ENST00000566577 (RRAD-004) 66921832-66924952 protein_coding
ENST00000567791 (RRAD-002) 66921687-66923898 retained_intron
ENST00000568915 (RRAD-003) 66921750-66924974 protein_coding
CIL_0003LX_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031881-ENSMUSG00000031880 CGP 10090 8:104614141-104631321
GeneTranscriptPositionBiotype
ENSMUSG00000031880 (Rrad)
Ras-related associated with diabetes 		ENSMUST00000034351 (Rrad-201) 104628066-104631321 protein_coding
ENSMUSG00000031881 (Cdh16)
cadherin 16 		ENSMUST00000163783 (Cdh16-201) 104614141-104624396 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003LX_0001ENSDARG00000052011ENSDART00000073735ENSDARG00000077570ENSDART00000109534ENSDARG00000090959ENSDART00000122315CIL_0003LX_0002ENSG00000166589ENST00000299752ENST00000394055ENST00000565235ENST00000565796ENST00000567009ENST00000567269ENST00000568632ENST00000568698ENST00000570262ENSG00000166592ENST00000299759ENST00000420652ENST00000566577ENST00000567791ENST00000568915CIL_0003LX_0003ENSMUSG00000031880ENSMUST00000034351ENSMUSG00000031881ENSMUST00000163783
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003LX_0001ENSDARG00000052011ENSDART00000073735ENSDARG00000077570ENSDART00000109534ENSDARG00000090959ENSDART00000122315CIL_0003LX_0002ENSG00000166589ENST00000299752ENST00000565235ENST00000565796ENST00000567009ENST00000567269ENST00000568632ENST00000568698ENST00000570262ENSG00000166592ENST00000299759ENST00000420652ENST00000566577ENST00000567791ENST00000568915CIL_0003LX_0003ENSMUSG00000031880ENSMUST00000034351ENSMUSG00000031881ENSMUST00000163783
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000052011 ENSDART00000073735 N/A N/A N/A 7.227±2.79 N/A N/A 119.095±120.55 1.000±0.11 0.259±0.00 N/A 2.102±0.00 N/A N/A N/A
ENSDARG00000077570 ENSDART00000109534 N/A N/A N/A 0.195±0.06 N/A N/A 0.217±0.17 0.066±0.00 N/A N/A 0.177±0.00 N/A N/A N/A
ENSDARG00000090959 ENSDART00000122315 N/A N/A N/A 7.944±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000166589 ENST00000299752 N/A N/A 17.859±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000394055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565235 N/A N/A N/A N/A 0.045±0.00 N/A N/A 0.131±0.00 N/A N/A N/A N/A N/A N/A
ENST00000565796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.168±0.00 N/A N/A
ENST00000567009 N/A N/A N/A 0.117±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567269 0.037±0.00 N/A N/A N/A N/A N/A N/A 50.278±0.00 N/A N/A N/A N/A N/A N/A
ENST00000568632 N/A N/A 7.591±0.00 N/A N/A N/A N/A 98.748±0.00 N/A N/A N/A 0.651±0.00 0.110±0.00 N/A
ENST00000568698 N/A 0.024±0.00 N/A 0.019±0.00 N/A 0.098±0.00 0.069±0.00 108.376±0.00 N/A N/A N/A 0.119±0.02 0.526±0.42 0.380±0.00
ENST00000570262 N/A N/A N/A N/A N/A N/A N/A 168.452±0.00 N/A N/A N/A 0.507±0.00 0.189±0.00 0.434±0.00
ENSG00000166592 ENST00000299759 2.603±0.00 4.068±0.00 1.409±0.00 3.050±0.00 3.945±1.37 11.767±0.00 14.223±8.08 24.012±0.00 2.136±0.00 62.077±0.00 125.292±94.12 17.675±15.62 65.638±35.81 7.352±6.43
ENST00000420652 4.596±0.00 2.161±0.00 N/A 0.788±0.00 5.820±0.00 0.391±0.00 12.590±0.00 0.107±0.00 0.271±0.00 0.495±0.00 N/A N/A N/A 1.601±0.60
ENST00000566577 N/A N/A N/A N/A N/A N/A N/A N/A 0.243±0.00 N/A N/A 3.999±2.97 42.317±0.00 5.510±0.00
ENST00000567791 N/A N/A 0.435±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000568915 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.338±0.00 46.843±0.00 7.208±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031880 ENSMUST00000034351 8.314±0.47 2.190±1.30 6.170±1.19 1.185±0.20 4.815±2.14 4.048±0.43 113.734±11.98 6.102±0.84 0.261±0.15 7.203±2.04 2.882±1.56 9.539±2.71 1.358±0.49 0.238±0.07
ENSMUSG00000031881 ENSMUST00000163783 0.594±0.40 N/A 0.002±0.00 0.013±0.00 0.054±0.04 0.014±0.00 0.039±0.01 287.121±45.58 0.021±0.01 4.673±0.73 N/A 2.442±1.00 0.032±0.03 0.200±0.14

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