C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TATA box binding protein (Tbp)-associated factor, RNA polymerase I, D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034415 Taf1d-201 ENSMUSG00000031939 10090 + 9:15306214-15312104 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderMuscleOvaryPlacentaENSMUST00000034415
Transcript ID Bladder Muscle Ovary Placenta
ENSMUST00000034415 11.598±2.80 1.767±0.46 8.505±1.83 11.769±0.87

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005668 IEA RNA polymerase transcription factor SL1 complex
GO:0005815 IEA microtubule organizing center
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000323981 TAF1D-002 nonsense_mediated_decay Homo_sapiens 0 326
ENST00000448108 TAF1D-001 protein_coding Homo_sapiens 0 326
ENST00000526015 TAF1D-004 nonsense_mediated_decay Homo_sapiens 0 326
ENST00000527068 TAF1D-010 retained_intron Homo_sapiens 0 244
ENST00000527169 TAF1D-003 nonsense_mediated_decay Homo_sapiens 0 313
ENST00000534770 TAF1D-008 nonsense_mediated_decay Homo_sapiens 0 265

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