C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: craniofacial development protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034432 Cfdp1-201 ENSMUSG00000031954 10090 - 8:111768473-111854310 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034432
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034432 9.915±1.35 10.647±1.00 21.146±1.05 51.643±29.19 7.819±1.74 5.778±1.95 7.089±1.47 12.933±1.45 23.371±15.11 9.561±3.94 8.120±1.17 34.032±45.38 138.984±125.04 49.432±78.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00024P CIL_00024P_0002 CGP 8:111710485-111854310
CIL_0002KK CIL_0002KK_0002 CGP 8:111768473-111876675

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005604 TAS basement membrane
GO:0007155 IDA cell adhesion
GO:0007275 IEA multicellular organismal development
GO:0008360 IDA regulation of cell shape
GO:0042127 IDA regulation of cell proliferation
GO:2000270 IDA negative regulation of fibroblast apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000283882 CFDP1-001 protein_coding Homo_sapiens 0 963
ENST00000562602 CFDP1-003 retained_intron Homo_sapiens 0 224
ENST00000564286 CFDP1-006 processed_transcript Homo_sapiens 0 449
ENST00000564793 CFDP1-010 processed_transcript Homo_sapiens 0 361
ENST00000565646 CFDP1-005 processed_transcript Homo_sapiens 6e-18 95
ENST00000566254 CFDP1-007 protein_coding Homo_sapiens 9e-19 97
ENST00000566901 CFDP1-004 retained_intron Homo_sapiens 0 529
ENST00000570103 CFDP1-002 processed_transcript Homo_sapiens 0 440

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