C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ST3 beta-galactoside alpha-2,3-sialyltransferase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034537 St3gal4-201 ENSMUSG00000032038 10090 - 9:35046579-35116810 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034537
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034537 6.892±2.66 34.105±5.14 4.369±1.53 2.855±0.11 6.912±2.70 24.121±5.57 4.900±1.53 3.825±0.36 14.540±6.62 9.450±1.96 1.589±0.41 34.729±9.38 13.419±6.68 4.719±1.27

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003836 IDA beta-galactoside (CMP) alpha-2,3-sialyltransferase activity
GO:0005515 IEA protein binding
GO:0006486 IEA protein glycosylation
GO:0016020 IEA membrane
GO:0030173 IEA integral component of Golgi membrane
GO:0047288 IEA monosialoganglioside sialyltransferase activity
GO:0050890 IEA cognition
GO:0070062 IEA extracellular vesicular exosome
GO:0097503 IEA sialylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000227495 ST3GAL4-008 protein_coding Homo_sapiens 0 1290
ENST00000356132 ST3GAL4-201 protein_coding Homo_sapiens 0 1171
ENST00000392669 ST3GAL4-011 protein_coding Homo_sapiens 0 1232
ENST00000444328 ST3GAL4-009 protein_coding Homo_sapiens 0 1339
ENST00000449406 ST3GAL4-005 protein_coding Homo_sapiens 0 1144
ENST00000524834 ST3GAL4-007 processed_transcript Homo_sapiens 0 438
ENST00000524860 ST3GAL4-021 protein_coding Homo_sapiens 0 952
ENST00000526727 ST3GAL4-003 protein_coding Homo_sapiens 0 1232
ENST00000530591 ST3GAL4-001 protein_coding Homo_sapiens 0 1138
ENST00000531217 ST3GAL4-006 nonsense_mediated_decay Homo_sapiens 0 852
ENST00000532243 ST3GAL4-004 protein_coding Homo_sapiens 0 1144
ENST00000533826 ST3GAL4-022 retained_intron Homo_sapiens 0 257
ENST00000534083 ST3GAL4-010 protein_coding Homo_sapiens 0 1232
ENST00000534457 ST3GAL4-013 protein_coding Homo_sapiens 0 1050

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