C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ST3 beta-galactoside alpha-2,3-sialyltransferase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000227495 ST3GAL4-008 ENSG00000110080 9606 + 11:126355660-126414604 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000227495
Transcript ID Adrenal Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000227495 5.959±0.00 2.079±0.98 11.167±0.00 10.535±0.00 8.759±0.00 9.104±0.00 0.628±0.00 10.872±0.00 12.446±1.41 9.161±1.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W7 CIL_0007W7_0001 VISTA 11:125757160-126360423

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005794 IEA Golgi apparatus
GO:0005975 TAS carbohydrate metabolic process
GO:0006486 IEA protein glycosylation
GO:0008373 IEA sialyltransferase activity
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016266 TAS O-glycan processing
GO:0018146 TAS keratan sulfate biosynthetic process
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0030173 IEA integral component of Golgi membrane
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0042339 TAS keratan sulfate metabolic process
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0050890 IMP cognition
GO:0070062 IDA extracellular vesicular exosome
GO:0097503 IEA sialylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034537 St3gal4-201 protein_coding Mus_musculus 0 1290

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