C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: decapping enzyme, scavenger
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034539 Dcps-001 ENSMUSG00000032040 10090 - 9:35124408-35176061 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034539
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034539 14.041±1.17 14.990±1.02 14.567±1.99 27.692±14.93 15.906±0.68 15.241±3.16 8.898±0.85 18.115±2.07 24.571±11.32 15.876±0.67 4.965±0.92 27.768±3.75 21.904±6.56 10.413±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W7 CIL_0007W7_0002 VISTA 9:35123876-35727017

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000290 IEA deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0000340 ISS RNA 7-methylguanosine cap binding
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0005739 IEA mitochondrion
GO:0036245 ISS cellular response to menadione
GO:0043069 ISS negative regulation of programmed cell death
GO:0045292 ISS mRNA cis splicing, via spliceosome
GO:0050072 ISS m7G(5')pppN diphosphatase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263579 DCPS-001 protein_coding Homo_sapiens 0 1105

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