C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: decapping enzyme, scavenger
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000263579 DCPS-001 ENSG00000110063 9606 + 11:126303752-126345749 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263579
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263579 7.182±0.00 17.565±0.00 2.240±0.78 5.260±0.00 5.204±3.47 2.327±1.53 6.369±5.71 19.965±0.00 4.239±2.81 15.545±0.00 15.073±9.73 11.314±2.95 7.869±1.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W7 CIL_0007W7_0001 VISTA 11:125757160-126360423

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000288 TAS nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000290 IEA deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0000340 IDA RNA 7-methylguanosine cap binding
GO:0003824 IEA catalytic activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005829 TAS cytosol
GO:0010467 TAS gene expression
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0016787 IEA hydrolase activity
GO:0036245 IDA cellular response to menadione
GO:0043069 IDA negative regulation of programmed cell death
GO:0043928 TAS exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay
GO:0045292 IDA mRNA cis splicing, via spliceosome
GO:0050072 IDA m7G(5')pppN diphosphatase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034539 Dcps-001 protein_coding Mus_musculus 0 1105
ENSMUST00000119847 Dcps-002 protein_coding Mus_musculus 0 846

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