C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transgelin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034590 Tagln-201 ENSMUSG00000032085 10090 - 9:45929628-45936058 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034590
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034590 320.596±227.91 58.347±11.42 3665.945±404.98 91.082±28.50 1102.836±201.52 43.834±8.83 41.684±9.57 16.396±3.18 143.683±29.26 17.552±2.60 607.894±170.75 110.403±136.54 20.053±10.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RC CIL_0007RC_0002 VISTA 9:45818249-46421546
CIL_0005WN CIL_0005WN_0002 CGP 9:45906569-45936058

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0030855 IEA epithelial cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000278968 TAGLN-006 protein_coding Homo_sapiens 0 931
ENST00000392951 TAGLN-001 protein_coding Homo_sapiens 0 885
ENST00000525531 TAGLN-008 protein_coding Homo_sapiens 0 837
ENST00000529622 TAGLN-004 protein_coding Homo_sapiens 0 575
ENST00000529792 TAGLN-007 protein_coding Homo_sapiens 0 390
ENST00000530649 TAGLN-005 protein_coding Homo_sapiens 0 928
ENST00000532870 TAGLN-003 protein_coding Homo_sapiens 0 929
ENST00000533863 TAGLN-002 retained_intron Homo_sapiens 0 368

Loading