C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone H4 transcription factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034629 Hinfp-201 ENSMUSG00000032119 10090 - 9:44295673-44305671 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034629
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034629 5.611±1.37 3.055±1.23 3.604±1.37 4.448±0.34 3.618±1.92 4.442±1.20 1.912±0.31 2.421±0.65 3.058±0.95 3.696±0.71 0.647±0.13 5.827±2.17 4.464±2.11 2.292±0.97

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000077 ISS DNA damage checkpoint
GO:0000082 ISS G1/S transition of mitotic cell cycle
GO:0000083 ISS regulation of transcription involved in G1/S transition of mitotic cell cycle
GO:0001701 IMP in utero embryonic development
GO:0003677 ISS DNA binding
GO:0003682 IDA chromatin binding
GO:0003700 IMP sequence-specific DNA binding transcription factor activity
GO:0003713 ISS transcription coactivator activity
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0005654 ISS nucleoplasm
GO:0006281 ISS DNA repair
GO:0006351 IMP transcription, DNA-templated
GO:0006355 ISS regulation of transcription, DNA-templated
GO:0010468 ISS regulation of gene expression
GO:0010628 IMP positive regulation of gene expression
GO:0010629 ISS negative regulation of gene expression
GO:0015030 ISS Cajal body
GO:0019899 IEA enzyme binding
GO:0042393 IEA histone binding
GO:0044212 ISS transcription regulatory region DNA binding
GO:0045184 ISS establishment of protein localization
GO:0045445 ISS myoblast differentiation
GO:0045892 ISS negative regulation of transcription, DNA-templated
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000350777 HINFP-001 protein_coding Homo_sapiens 0 1864
ENST00000527206 HINFP-006 retained_intron Homo_sapiens 0 217
ENST00000527354 HINFP-014 processed_transcript Homo_sapiens 0 706
ENST00000527410 HINFP-002 protein_coding Homo_sapiens 0 1513
ENST00000527755 HINFP-004 retained_intron Homo_sapiens 0 968
ENST00000529354 HINFP-003 retained_intron Homo_sapiens 0 534
ENST00000529808 HINFP-011 retained_intron Homo_sapiens 0 804
ENST00000529988 HINFP-005 protein_coding Homo_sapiens 0 396
ENST00000530678 HINFP-007 protein_coding Homo_sapiens 0 217
ENST00000531022 HINFP-009 retained_intron Homo_sapiens 0 1260
ENST00000531360 HINFP-013 retained_intron Homo_sapiens 0 344
ENST00000532312 HINFP-008 protein_coding Homo_sapiens 0 534
ENST00000532860 HINFP-012 retained_intron Homo_sapiens 0 350

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