C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone H4 transcription factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000527410 HINFP-002 ENSG00000172273 9606 + 11:119121616-119134314 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000527410
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000527410 1.291±0.00 1.383±0.00 0.459±0.00 2.096±0.00 0.710±0.00 2.516±0.56 0.656±0.00 1.703±1.16 1.259±0.00 2.929±1.76 2.932±0.00 8.320±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000077 IMP DNA damage checkpoint
GO:0000082 IMP G1/S transition of mitotic cell cycle
GO:0000083 IMP regulation of transcription involved in G1/S transition of mitotic cell cycle
GO:0001701 ISS in utero embryonic development
GO:0003677 IDA DNA binding
GO:0003700 IMP sequence-specific DNA binding transcription factor activity
GO:0003713 IDA transcription coactivator activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 IDA nucleoplasm
GO:0006281 IMP DNA repair
GO:0006355 IMP regulation of transcription, DNA-templated
GO:0010468 IMP regulation of gene expression
GO:0010628 IMP positive regulation of gene expression
GO:0010629 IMP negative regulation of gene expression
GO:0015030 IDA Cajal body
GO:0019899 IPI enzyme binding
GO:0042393 IPI histone binding
GO:0044212 IDA transcription regulatory region DNA binding
GO:0045184 IMP establishment of protein localization
GO:0045445 IMP myoblast differentiation
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034629 Hinfp-201 protein_coding Mus_musculus 0 1513

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