C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: secretogranin III
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034699 Scg3-201 ENSMUSG00000032181 10090 - 9:75643264-75683996 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034699
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034699 0.405±0.28 13.564±6.87 0.162±0.04 56.684±52.16 8.635±5.08 1.426±0.47 0.072±0.02 0.097±0.04 0.017±0.01 0.155±0.02 0.109±0.03 0.301±0.16 0.026±0.02 0.185±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004YG CIL_0004YG_0002 CGP 9:75625732-75683996

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005576 IEA extracellular region
GO:0016020 IEA membrane
GO:0031410 IEA cytoplasmic vesicle
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000220478 SCG3-001 protein_coding Homo_sapiens 0 1652
ENST00000542355 SCG3-002 protein_coding Homo_sapiens 0 1437

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