C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: feminization 1 homolog b (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034775 Fem1b-201 ENSMUSG00000032244 10090 - 9:62791832-62811648 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034775
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034775 6.328±2.69 9.533±0.42 6.185±0.14 20.332±3.53 7.336±2.65 5.710±0.30 3.208±0.29 5.537±0.37 4.581±2.38 11.185±0.70 2.588±0.31 14.481±3.04 25.017±4.76 44.825±15.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004FA CIL_0004FA_0002 CGP 9:62677826-62811648
CIL_0003W4 CIL_0003W4_0002 CGP 9:62791832-62852006

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002070 IMP epithelial cell maturation
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005123 IEA death receptor binding
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0006915 IEA apoptotic process
GO:0016567 IEA protein ubiquitination
GO:0051438 IEA regulation of ubiquitin-protein transferase activity
GO:0060442 IMP branching involved in prostate gland morphogenesis
GO:0060743 IMP epithelial cell maturation involved in prostate gland development
GO:1902041 IEA regulation of extrinsic apoptotic signaling pathway via death domain receptors
GO:2000001 ISS regulation of DNA damage checkpoint

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306917 FEM1B-001 protein_coding Homo_sapiens 0 3134
ENST00000566008 FEM1B-004 protein_coding Homo_sapiens 0 824
ENST00000566739 FEM1B-003 protein_coding Homo_sapiens 0 662
ENST00000570067 FEM1B-002 protein_coding Homo_sapiens 0 361

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