C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003W4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000062636-ENSDARG00000090002 CGP 7955 25:1372389-1387005
GeneTranscriptPositionBiotype
ENSDARG00000062636 (fem1b)
fem-1 homolog b (C. elegans) 		ENSDART00000090803 (fem1b-001) 1372389-1377421 protein_coding
ENSDARG00000090002 (cln6b)
ceroid-lipofuscinosis, neuronal 6b 		ENSDART00000127656 (cln6b-001) 1378447-1387005 protein_coding
CIL_0003W4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032244-ENSMUSG00000032245 CGP 10090 9:62791832-62852006
GeneTranscriptPositionBiotype
ENSMUSG00000032244 (Fem1b)
feminization 1 homolog b (C. elegans) 		ENSMUST00000034775 (Fem1b-201) 62791832-62811648 protein_coding
ENSMUSG00000032245 (Cln6)
ceroid-lipofuscinosis, neuronal 6 		ENSMUST00000034776 (Cln6-001) 62838785-62852006 protein_coding
ENSMUST00000124984 (Cln6-004) 62847033-62851162 protein_coding
ENSMUST00000138276 (Cln6-003) 62846015-62850711 nonsense_mediated_decay
ENSMUST00000141821 (Cln6-002) 62838792-62846018 nonsense_mediated_decay
ENSMUSG00000097672 (Gm26609)
predicted gene, 26609 		ENSMUST00000181302 (Gm26609-201) 62804478-62808234 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003W4_0001ENSDARG00000062636ENSDART00000090803ENSDARG00000090002ENSDART00000127656CIL_0003W4_0002ENSMUSG00000032244ENSMUST00000034775ENSMUSG00000032245ENSMUST00000034776ENSMUST00000124984ENSMUST00000138276ENSMUST00000141821ENSMUSG00000097672ENSMUST00000181302
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003W4_0001ENSDARG00000062636ENSDART00000090803ENSDARG00000090002ENSDART00000127656CIL_0003W4_0002ENSMUSG00000032244ENSMUST00000034775ENSMUSG00000032245ENSMUST00000034776ENSMUST00000138276ENSMUSG00000097672ENSMUST00000181302
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000062636 ENSDART00000090803 N/A N/A N/A 2.592±1.61 N/A N/A 2.378±1.02 2.402±1.16 0.785±0.00 N/A 2.913±0.00 N/A N/A N/A
ENSDARG00000090002 ENSDART00000127656 N/A N/A N/A 0.201±0.04 N/A N/A N/A 0.717±0.50 0.038±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032244 ENSMUST00000034775 6.328±2.69 9.533±0.42 6.185±0.14 20.332±3.53 7.336±2.65 5.710±0.30 3.208±0.29 5.537±0.37 4.581±2.38 11.185±0.70 2.588±0.31 14.481±3.04 25.017±4.76 44.825±15.95
ENSMUSG00000032245 ENSMUST00000034776 14.834±5.53 23.752±1.01 12.190±0.69 3.015±1.21 17.482±0.70 26.076±2.76 8.751±2.19 28.033±1.55 7.531±5.96 17.535±0.81 6.155±0.40 21.843±7.25 27.855±16.98 31.680±15.53
ENSMUST00000124984 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.475±0.00
ENSMUST00000141821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097672 ENSMUST00000181302 0.090±0.04 0.173±0.00 0.020±0.00 0.029±0.00 0.154±0.09 0.227±0.08 0.065±0.02 0.061±0.00 0.059±0.04 0.135±0.06 N/A 0.169±0.20 0.173±0.14 0.044±0.01

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