C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lactase-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034969 Lctl-001 ENSMUSG00000032401 10090 + 9:64117147-64138118 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLungMuscleOvaryENSMUST00000034969
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Lung Muscle Ovary
ENSMUST00000034969 14.220±8.87 2.989±0.30 0.499±0.00 2.980±1.35 0.113±0.00 0.230±0.07 0.982±0.31 0.250±0.02 0.152±0.00 0.961±0.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008R9 CIL_0008R9_0002 VISTA 9:63580198-64181507
CIL_0008Q7 CIL_0008Q7_0002 VISTA 9:63744784-64346949

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004553 IEA hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005783 IDA endoplasmic reticulum
GO:0005975 IEA carbohydrate metabolic process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000341509 LCTL-001 protein_coding Homo_sapiens 0 1574
ENST00000537670 LCTL-003 protein_coding Homo_sapiens 0 1351
ENST00000563438 LCTL-005 processed_transcript Homo_sapiens 0 220
ENST00000565875 LCTL-002 nonsense_mediated_decay Homo_sapiens 0 562

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