C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chondroitin sulfate proteoglycan 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035058 Cspg5-201 ENSMUSG00000032482 10090 + 9:110243783-110262575 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035058
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035058 0.500±0.18 3.814±2.24 4.614±0.14 25.588±13.92 0.273±0.05 0.431±0.11 0.055±0.03 0.386±0.07 0.054±0.02 0.183±0.04 0.015±0.00 1.029±0.51 0.692±0.15 0.418±0.12

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005794 ISS Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane
GO:0030660 ISS Golgi-associated vesicle membrane
GO:0031103 IEA axon regeneration
GO:0040008 IEA regulation of growth
GO:0050804 IMP regulation of synaptic transmission

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264723 CSPG5-002 protein_coding Homo_sapiens 0 1616
ENST00000383738 CSPG5-001 protein_coding Homo_sapiens 0 2213
ENST00000456150 CSPG5-003 protein_coding Homo_sapiens 0 1288
ENST00000610462 CSPG5-201 protein_coding Homo_sapiens 0 1411

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