C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: differentially expressed in B16F10 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035113 Deb1-201 ENSMUSG00000032526 10090 + 9:121710389-121712921 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035113
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035113 14.096±4.30 3.251±0.66 18.346±2.20 29.220±10.73 15.933±9.59 8.674±0.96 59.738±3.02 29.393±3.05 25.885±4.19 9.289±0.92 64.659±4.73 7.993±6.56 23.136±8.07 4.895±0.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00047Z CIL_00047Z_0002 CGP 9:121680047-121712921
CIL_000488 CIL_000488_0002 CGP 9:121710389-121756843

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000011691 SS18L2-201 protein_coding Homo_sapiens 0 237
ENST00000445923 SS18L2P1-001 processed_pseudogene Homo_sapiens 0 237
ENST00000447630 SS18L2-001 protein_coding Homo_sapiens 0 237
ENST00000474941 SS18L2-002 retained_intron Homo_sapiens 0 193

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