C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB24, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035242 Rab24-201 ENSMUSG00000034789 10090 - 13:55319223-55321980 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035242
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035242 24.566±3.15 61.060±8.54 28.892±5.69 31.210±5.81 27.142±7.91 36.772±3.97 7.456±2.06 28.842±1.47 23.976±2.96 28.506±1.84 9.252±1.58 39.110±10.51 31.648±7.73 7.620±2.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A2 CIL_0008A2_0002 VISTA 13:55104361-55707564
CIL_0002YK CIL_0002YK_0002 CGP 13:55209782-55321980

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005739 IDA mitochondrion
GO:0005776 IDA autophagic vacuole
GO:0006914 IEA autophagy
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000303251 RAB24-001 protein_coding Homo_sapiens 0 985
ENST00000303270 RAB24-003 protein_coding Homo_sapiens 0 778
ENST00000393610 RAB24-009 retained_intron Homo_sapiens 0 278
ENST00000393611 RAB24-006 protein_coding Homo_sapiens 0 983
ENST00000471466 RAB24-005 retained_intron Homo_sapiens 0 368
ENST00000478234 RAB24-002 retained_intron Homo_sapiens 0 542
ENST00000495458 RAB24-004 retained_intron Homo_sapiens 0 444
ENST00000503473 MXD3-005 retained_intron Homo_sapiens 0 983
ENST00000504395 RAB24-007 protein_coding Homo_sapiens 0 296
ENST00000509339 MXD3-007 retained_intron Homo_sapiens 0 357
ENST00000512758 RAB24-008 retained_intron Homo_sapiens 0 206

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