C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002YK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165671-ENSG00000169228 CGP 9606 5:177133025-177303744
GeneTranscriptPositionBiotype
ENSG00000165671 (NSD1)
nuclear receptor binding SET domain protein 1 		ENST00000347982 (NSD1-002) 177134229-177295762 protein_coding
ENST00000354179 (NSD1-201) 177133079-177300210 protein_coding
ENST00000375350 (NSD1-007) 177212111-177239865 nonsense_mediated_decay
ENST00000439151 (NSD1-001) 177133925-177300215 protein_coding
ENST00000503056 (NSD1-009) 177265727-177280583 protein_coding
ENST00000504457 (NSD1-010) 177266337-177269684 protein_coding
ENST00000505395 (NSD1-011) 177266380-177269671 protein_coding
ENST00000508029 (NSD1-008) 177265465-177269758 protein_coding
ENST00000508896 (NSD1-004) 177133600-177209672 protein_coding
ENST00000510954 (NSD1-005) 177133079-177204236 protein_coding
ENST00000511258 (NSD1-003) 177134173-177137404 protein_coding
ENST00000512992 (NSD1-006) 177133025-177135426 retained_intron
ENST00000513736 (NSD1-013) 177288526-177292127 retained_intron
ENST00000515735 (NSD1-012) 177266587-177273678 protein_coding
ENST00000602285 (NSD1-014) 177133798-177136345 retained_intron
ENSG00000169228 (RAB24)
RAB24, member RAS oncogene family 		ENST00000303251 (RAB24-001) 177301464-177303708 protein_coding
ENST00000303270 (RAB24-003) 177301486-177303710 protein_coding
ENST00000393610 (RAB24-009) 177302235-177303642 retained_intron
ENST00000393611 (RAB24-006) 177301451-177303706 protein_coding
ENST00000471466 (RAB24-005) 177301503-177303705 retained_intron
ENST00000478234 (RAB24-002) 177301198-177303733 retained_intron
ENST00000495458 (RAB24-004) 177301452-177303681 retained_intron
ENST00000504395 (RAB24-007) 177302820-177303744 protein_coding
ENST00000512758 (RAB24-008) 177303057-177303661 retained_intron
ENSG00000240729 (CTD-2301A4.3)
 ENST00000460608 (CTD-2301A4.3-001) 177264766-177265241 processed_pseudogene
CIL_0002YK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021488-ENSMUSG00000034789 CGP 10090 13:55209782-55321980
GeneTranscriptPositionBiotype
ENSMUSG00000021488 (Nsd1)
nuclear receptor-binding SET-domain protein 1 		ENSMUST00000099490 (Nsd1-201) 55209782-55318325 protein_coding
ENSMUSG00000034789 (Rab24)
RAB24, member RAS oncogene family 		ENSMUST00000035242 (Rab24-201) 55319223-55321980 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002YK_0001ENSG00000165671ENST00000347982ENST00000354179ENST00000375350ENST00000439151ENST00000503056ENST00000504457ENST00000505395ENST00000508029ENST00000508896ENST00000510954ENST00000511258ENST00000512992ENST00000513736ENST00000515735ENST00000602285ENSG00000169228ENST00000303251ENST00000303270ENST00000393610ENST00000393611ENST00000471466ENST00000478234ENST00000495458ENST00000504395ENST00000512758ENSG00000240729ENST00000460608CIL_0002YK_0002ENSMUSG00000021488ENSMUST00000099490ENSMUSG00000034789ENSMUST00000035242
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002YK_0001ENSG00000165671ENST00000347982ENST00000354179ENST00000439151ENSG00000169228ENST00000303251ENST00000393611ENST00000478234ENST00000495458ENSG00000240729ENST00000460608CIL_0002YK_0002ENSMUSG00000021488ENSMUST00000099490ENSMUSG00000034789ENSMUST00000035242
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000165671 ENST00000347982 2.841±0.00 3.455±0.00 1.018±0.00 1.360±0.21 3.387±0.69 2.505±0.00 0.968±0.32 2.297±0.25 1.255±0.00 2.319±0.00 2.899±1.33 2.576±1.39 1.582±0.18 5.600±0.89
ENST00000354179 N/A N/A 1.293±0.00 N/A N/A 1.711±0.00 1.769±0.00 N/A N/A N/A 0.424±0.00 N/A N/A N/A
ENST00000375350 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439151 0.386±0.00 N/A N/A 1.146±0.00 1.285±0.00 0.584±0.00 0.768±0.04 1.205±0.00 1.746±0.00 2.059±0.00 N/A 1.047±0.00 0.999±0.48 N/A
ENST00000503056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508029 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508896 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510954 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512992 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000169228 ENST00000303251 8.248±0.00 21.961±0.00 N/A 14.995±0.00 11.807±0.00 9.140±0.00 9.281±0.00 21.585±0.00 0.933±0.00 15.123±13.56 7.744±0.00 19.656±4.85 N/A 13.866±0.00
ENST00000303270 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000393610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000393611 N/A N/A N/A 1.875±0.00 N/A N/A N/A N/A N/A N/A 0.894±0.00 N/A N/A N/A
ENST00000471466 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478234 N/A N/A N/A 2.803±1.47 0.945±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495458 N/A N/A N/A N/A N/A N/A 0.443±0.00 N/A N/A 1.123±0.00 N/A N/A N/A N/A
ENST00000504395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512758 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000240729 ENST00000460608 0.103±0.00 0.643±0.00 0.515±0.00 0.155±0.10 0.714±0.66 0.024±0.00 0.137±0.04 0.642±0.62 0.433±0.36 0.199±0.10 0.096±0.00 0.159±0.03 N/A 0.201±0.16
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021488 ENSMUST00000099490 6.286±4.26 2.933±1.29 8.755±0.20 9.626±2.92 4.173±1.91 1.831±0.34 2.329±1.28 3.830±2.27 4.379±2.10 4.144±2.02 2.468±1.63 5.887±4.77 11.967±0.99 1.204±0.66
ENSMUSG00000034789 ENSMUST00000035242 24.566±3.15 61.060±8.54 28.892±5.69 31.210±5.81 27.142±7.91 36.772±3.97 7.456±2.06 28.842±1.47 23.976±2.96 28.506±1.84 9.252±1.58 39.110±10.51 31.648±7.73 7.620±2.05

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