C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Spi-B transcription factor (Spi-1/PU.1 related)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035323 Spib-201 ENSMUSG00000008193 10090 - 7:44525995-44532071 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035323
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035323 0.350±0.09 0.184±0.10 0.083±0.04 0.024±0.01 13.354±3.66 3.877±0.42 0.508±0.28 1.514±1.03 0.536±0.76 2.526±0.48 0.358±0.72 0.358±0.21 0.113±0.07 0.075±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005634 IBA nucleus
GO:0005667 IC transcription factor complex
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0030225 IDA macrophage differentiation
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000187762 TMEM38A-001 protein_coding Homo_sapiens 0.0000003 62
ENST00000270632 SPIB-003 protein_coding Homo_sapiens 0 715
ENST00000439922 SPIB-201 protein_coding Homo_sapiens 0 516
ENST00000595883 SPIB-001 protein_coding Homo_sapiens 0 737
ENST00000596074 SPIB-002 protein_coding Homo_sapiens 0 516
ENST00000599632 CTD-2545M3.6-001 protein_coding Homo_sapiens 0 699

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