C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: periplakin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035672 Ppl-201 ENSMUSG00000039457 10090 - 16:5086291-5132481 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035672
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035672 0.906±0.83 0.483±0.13 10.839±4.64 0.501±0.36 1.133±0.30 1.037±0.26 1.053±0.28 1.947±0.30 1.127±0.86 15.989±3.77 0.572±0.23 3.685±3.74 10.344±8.51 0.281±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001FC CIL_0001FC_0002 CGP 16:5050068-5132481
CIL_00004R CIL_00004R_0002 CGP 16:5086291-5183934

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005856 IEA cytoskeleton
GO:0019897 TAS extrinsic component of plasma membrane
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000345988 PPL-001 protein_coding Homo_sapiens 0 5321
ENST00000590782 PPL-003 protein_coding Homo_sapiens 0 5313
ENST00000592772 PPL-002 protein_coding Homo_sapiens 0 2850

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