C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ras association (RalGDS/AF-6) domain family member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035842 Rassf4-201 ENSMUSG00000042129 10090 - 6:116633008-116673836 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035842
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035842 6.110±0.62 1.683±0.43 3.736±0.14 2.275±1.08 8.817±1.60 4.598±1.39 1.308±0.41 1.159±0.20 1.238±0.58 7.906±1.06 0.368±0.15 5.922±1.54 8.437±7.58 0.204±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081B CIL_00081B_0002 VISTA 6:116052182-116663911
CIL_0000R2 CIL_0000R2_0002 CGP 6:116633008-116673836

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0007049 IEA cell cycle
GO:0007165 IEA signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000340258 RASSF4-001 protein_coding Homo_sapiens 0 928
ENST00000465735 RASSF4-003 retained_intron Homo_sapiens 0 603
ENST00000471941 RASSF4-004 retained_intron Homo_sapiens 0 475
ENST00000472561 RASSF4-012 processed_transcript Homo_sapiens 0 645
ENST00000489171 RASSF4-002 retained_intron Homo_sapiens 0 859
ENST00000493490 RASSF4-011 retained_intron Homo_sapiens 0 250

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