C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MAM domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000036069 Mamdc2-201 ENSMUSG00000033207 10090 - 19:23302609-23448322 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036069
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036069 3.892±2.15 2.266±0.32 6.636±0.08 0.388±0.15 0.877±0.38 3.805±1.76 0.961±0.16 0.465±0.13 0.609±0.45 18.215±15.53 0.488±0.17 11.040±3.86 0.189±0.15 0.213±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000F3 CIL_0000F3_0002 CGP 19:23206441-23448322

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005539 IDA glycosaminoglycan binding
GO:0005614 IDA interstitial matrix
GO:0005783 IEA endoplasmic reticulum
GO:0016020 IEA membrane
GO:0019800 IDA peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan
GO:0031012 IDA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000377182 MAMDC2-001 protein_coding Homo_sapiens 0 2492
ENST00000617216 MAMDC2-001 protein_coding Homo_sapiens 0 1814

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