C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000F3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000044282-ENSDARG00000073695 CGP 7955 10:15646672-15701436
GeneTranscriptPositionBiotype
ENSDARG00000044282 (smc5)
structural maintenance of chromosomes 5 		ENSDART00000101191 (smc5-001) 15646672-15673514 protein_coding
ENSDART00000122170 (smc5-201) 15646793-15673429 protein_coding
ENSDART00000138389 (smc5-004) 15665764-15673478 protein_coding
ENSDART00000142673 (smc5-003) 15646790-15647589 processed_transcript
ENSDART00000147693 (smc5-002) 15651472-15659932 retained_intron
ENSDARG00000073695 (mamdc2b)
MAM domain containing 2b 		ENSDART00000109231 (mamdc2b-001) 15677431-15701436 protein_coding
CIL_0000F3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024943-ENSMUSG00000033207 CGP 10090 19:23206441-23448322
GeneTranscriptPositionBiotype
ENSMUSG00000024943 (Smc5)
structural maintenance of chromosomes 5 		ENSMUST00000087556 (Smc5-201) 23206441-23273897 protein_coding
ENSMUSG00000033207 (Mamdc2)
MAM domain containing 2 		ENSMUST00000036069 (Mamdc2-201) 23302609-23448322 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000F3_0001ENSDARG00000044282ENSDART00000101191ENSDART00000122170ENSDART00000138389ENSDART00000142673ENSDART00000147693ENSDARG00000073695ENSDART00000109231CIL_0000F3_0002ENSMUSG00000024943ENSMUST00000087556ENSMUSG00000033207ENSMUST00000036069
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000F3_0001ENSDARG00000044282ENSDART00000101191ENSDART00000122170ENSDART00000138389ENSDARG00000073695ENSDART00000109231CIL_0000F3_0002ENSMUSG00000024943ENSMUST00000087556ENSMUSG00000033207ENSMUST00000036069
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000044282 ENSDART00000101191 N/A N/A N/A 0.317±0.07 N/A N/A 3.493±1.80 10.376±2.49 0.185±0.00 N/A 0.691±0.00 N/A N/A N/A
ENSDART00000122170 N/A N/A N/A 1.829±1.41 N/A N/A 5.491±0.11 10.686±0.00 0.318±0.00 N/A 0.804±0.00 N/A N/A N/A
ENSDART00000138389 N/A N/A N/A 0.679±0.06 N/A N/A N/A 5.735±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000142673 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147693 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000073695 ENSDART00000109231 N/A N/A N/A 0.782±0.49 N/A N/A 0.227±0.12 1.484±0.37 N/A N/A 6.924±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024943 ENSMUST00000087556 1.581±1.21 2.337±0.91 1.210±0.00 6.042±1.45 1.619±0.68 1.208±0.70 0.782±0.45 0.446±0.19 2.013±1.01 1.657±0.25 0.575±0.21 2.639±2.62 4.810±3.20 15.302±15.43
ENSMUSG00000033207 ENSMUST00000036069 3.892±2.15 2.266±0.32 6.636±0.08 0.388±0.15 0.877±0.38 3.805±1.76 0.961±0.16 0.465±0.13 0.609±0.45 18.215±15.53 0.488±0.17 11.040±3.86 0.189±0.15 0.213±0.21

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