C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane and ubiquitin-like domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000036376 Tmub2-002 ENSMUSG00000034757 10090 + 11:102284931-102289237 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036376
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036376 8.809±0.60 6.361±2.04 12.357±2.06 10.337±5.26 6.972±2.18 8.036±2.72 4.097±0.90 8.807±1.47 8.075±3.06 7.985±1.33 5.757±1.55 9.753±5.52 8.171±3.25 7.207±3.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B6 CIL_0009B6_0002 VISTA 11:102063033-102664797
CIL_0000KZ CIL_0000KZ_0003 CGP 11:102268743-102289237
CIL_0003L7 CIL_0003L7_0003 CGP 11:102284931-102296631

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000319511 TMUB2-002 protein_coding Homo_sapiens 0 1334
ENST00000357984 TMUB2-201 protein_coding Homo_sapiens 0 1334
ENST00000446571 TMUB2-003 protein_coding Homo_sapiens 0 335
ENST00000538716 TMUB2-001 protein_coding Homo_sapiens 0 1454
ENST00000587172 TMUB2-008 protein_coding Homo_sapiens 0 333
ENST00000587326 TMUB2-007 nonsense_mediated_decay Homo_sapiens 0 333
ENST00000587775 TMUB2-014 nonsense_mediated_decay Homo_sapiens 3e-25 119
ENST00000587989 TMUB2-004 protein_coding Homo_sapiens 0 1402
ENST00000588413 TMUB2-013 nonsense_mediated_decay Homo_sapiens 2e-24 117
ENST00000589184 TMUB2-005 protein_coding Homo_sapiens 4e-24 117
ENST00000589785 TMUB2-009 protein_coding Homo_sapiens 0 1332
ENST00000589856 TMUB2-011 protein_coding Homo_sapiens 0 566
ENST00000590235 TMUB2-006 protein_coding Homo_sapiens 0 333
ENST00000592825 TMUB2-010 protein_coding Homo_sapiens 0 333

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