C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 21
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000036759 Fam21-201 ENSMUSG00000024104 10090 + 6:116208033-116262668 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036759
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036759 9.746±1.04 8.165±2.17 12.685±0.79 19.002±7.85 6.913±1.44 5.891±0.92 3.255±0.27 9.504±0.60 6.117±1.19 9.767±0.92 6.755±0.38 11.362±5.38 20.396±4.28 2.343±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081B CIL_00081B_0002 VISTA 6:116052182-116663911

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005769 ISS early endosome
GO:0016020 IEA membrane
GO:0042147 ISS retrograde transport, endosome to Golgi
GO:0071203 ISS WASH complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000282633 FAM21A-005 protein_coding Homo_sapiens 0 2854
ENST00000314664 FAM21A-201 protein_coding Homo_sapiens 0 2058
ENST00000336378 FAM21C-201 protein_coding Homo_sapiens 0 2837
ENST00000351071 FAM21A-202 protein_coding Homo_sapiens 0 2124
ENST00000359860 FAM21C-202 protein_coding Homo_sapiens 0 2501
ENST00000374359 FAM21C-002 retained_intron Homo_sapiens 0 361
ENST00000374362 FAM21C-001 protein_coding Homo_sapiens 0 2119
ENST00000399339 FAM21A-203 protein_coding Homo_sapiens 0 2507
ENST00000417804 FAM21EP-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 534
ENST00000420848 FAM21C-004 protein_coding Homo_sapiens 0 623
ENST00000426241 FAM21FP-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 586
ENST00000434114 FAM21A-001 nonsense_mediated_decay Homo_sapiens 0 1799
ENST00000454806 FAM21A-002 protein_coding Homo_sapiens 0 361
ENST00000456967 FAM21EP-002 processed_transcript Homo_sapiens 0 267
ENST00000471102 FAM21C-003 retained_intron Homo_sapiens 0 662
ENST00000476514 FAM21A-004 processed_transcript Homo_sapiens 0 263
ENST00000485850 FAM21C-005 retained_intron Homo_sapiens 0 263
ENST00000492914 FAM21A-003 processed_transcript Homo_sapiens 0 460
ENST00000537517 FAM21C-203 protein_coding Homo_sapiens 0 959
ENST00000540872 FAM21C-204 protein_coding Homo_sapiens 0 2052
ENST00000611324 FAM21A-204 protein_coding Homo_sapiens 0 965
ENST00000623400 FAM21C-006 protein_coding Homo_sapiens 0 2837

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