C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 21, member C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000540872 FAM21C-204 ENSG00000172661 9606 + 10:45727200-45792961 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainHeartLiverLungOvaryPlacentaENST00000540872
Transcript ID Adipose Brain Heart Liver Lung Ovary Placenta
ENST00000540872 0.631±0.00 0.912±0.00 0.303±0.00 0.524±0.00 0.534±0.00 0.459±0.00 0.646±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081B CIL_00081B_0001 VISTA 10:45257434-45860222
CIL_0006FR CIL_0006FR_0002 CGP 10:45615501-45792964

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005768 IDA endosome
GO:0005769 ISS:IDA early endosome
GO:0005886 IEA plasma membrane
GO:0042147 ISS:IMP retrograde transport, endosome to Golgi
GO:0071203 ISS:IDA WASH complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036759 Fam21-201 protein_coding Mus_musculus 0 2052

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