C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DENN/MADD domain containing 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000036877 Dennd2a-001 ENSMUSG00000038456 10090 - 6:39462378-39557867 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036877
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036877 5.172±1.68 0.261±0.06 4.538±0.50 6.702±2.63 2.510±0.49 0.835±0.34 1.061±0.34 1.286±0.27 0.541±0.27 4.495±0.46 0.570±0.23 5.586±2.41 5.366±1.45 0.464±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ZU CIL_0008ZU_0002 VISTA 6:38939568-39543498
CIL_000306 CIL_000306_0002 CGP 6:39462378-39596595

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0015031 IEA protein transport
GO:0015629 ISS actin cytoskeleton
GO:0017112 ISS Rab guanyl-nucleotide exchange factor activity
GO:0032851 ISS positive regulation of Rab GTPase activity
GO:0042147 ISS retrograde transport, endosome to Golgi

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000275884 DENND2A-001 protein_coding Homo_sapiens 0 2654
ENST00000461883 DENND2A-005 nonsense_mediated_decay Homo_sapiens 0 1866
ENST00000469373 DENND2A-010 protein_coding Homo_sapiens 0 497
ENST00000475837 DENND2A-006 protein_coding Homo_sapiens 0 606
ENST00000492720 DENND2A-003 protein_coding Homo_sapiens 0 1860
ENST00000496613 DENND2A-002 protein_coding Homo_sapiens 0 2654
ENST00000537639 DENND2A-201 protein_coding Homo_sapiens 0 2654

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