C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 30 (zinc transporter), member 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000037240 Slc30a8-001 ENSMUSG00000022315 10090 + 15:52295553-52335798 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonKidneyLiverOvaryPlacentaTestisENSMUST00000037240
Transcript ID Brain Colon Kidney Liver Ovary Placenta Testis
ENSMUST00000037240 0.027±0.01 0.083±0.04 0.026±0.01 0.069±0.06 0.038±0.03 0.003±0.00 0.067±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZT CIL_0007ZT_0002 VISTA 15:52034869-52635444
CIL_0005RU CIL_0005RU_0002 CGP 15:52040107-52335798

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005385 IEA zinc ion transmembrane transporter activity
GO:0005886 IEA plasma membrane
GO:0006829 IEA zinc ion transport
GO:0006882 IMP cellular zinc ion homeostasis
GO:0009749 IMP response to glucose
GO:0016021 IEA integral component of membrane
GO:0016023 IDA cytoplasmic membrane-bounded vesicle
GO:0030073 IMP insulin secretion
GO:0030141 IEA secretory granule
GO:0031410 IEA cytoplasmic vesicle
GO:0032024 IEA positive regulation of insulin secretion
GO:0032119 IEA sequestering of zinc ion
GO:0034341 IEA response to interferon-gamma
GO:0042803 IPI protein homodimerization activity
GO:0060627 IEA regulation of vesicle-mediated transport
GO:0061088 IEA regulation of sequestering of zinc ion
GO:0070555 IEA response to interleukin-1
GO:0071577 IEA zinc ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000427715 SLC30A8-201 protein_coding Homo_sapiens 0 953
ENST00000456015 SLC30A8-002 protein_coding Homo_sapiens 0 1011
ENST00000519688 SLC30A8-001 protein_coding Homo_sapiens 0 953
ENST00000521243 SLC30A8-003 protein_coding Homo_sapiens 0 946

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