C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007ZT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm2 VISTA 9606 8:116872414-117472859
GeneTranscriptPositionBiotype
ENSG00000164754 (RAD21)
RAD21 homolog (S. pombe) 		ENST00000297338 (RAD21-001) 116845935-116874866 protein_coding
ENST00000517485 (RAD21-005) 116857279-116874528 protein_coding
ENST00000517749 (RAD21-009) 116847227-116849483 protein_coding
ENST00000518055 (RAD21-010) 116847334-116852251 protein_coding
ENST00000519469 (RAD21-008) 116863117-116866991 retained_intron
ENST00000519837 (RAD21-011) 116861843-116874360 protein_coding
ENST00000520992 (RAD21-006) 116857271-116874424 protein_coding
ENST00000522699 (RAD21-004) 116861854-116874360 protein_coding
ENST00000523547 (RAD21-007) 116857289-116874328 processed_transcript
ENST00000523986 (RAD21-003) 116846905-116852252 protein_coding
ENSG00000205002 (AARD)
alanine and arginine rich domain containing protein 		ENST00000378279 (AARD-001) 116938199-116944487 protein_coding
ENST00000523536 (AARD-002) 116938546-116942922 processed_transcript
ENSG00000240151 (RN7SL826P)
RNA, 7SL, cytoplasmic 826, pseudogene 		ENST00000479724 (RN7SL826P-201) 117163968-117164255 misc_RNA
ENSG00000253271 (RP11-1059L18.1)
 ENST00000522976 (RP11-1059L18.1-001) 117055818-117056145 processed_pseudogene
ENSG00000253622 (RP11-654G14.1)
 ENST00000518439 (RP11-654G14.1-001) 117128455-117130299 sense_intronic
CIL_0007ZT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm2 VISTA 10090 15:52034869-52635444
GeneTranscriptPositionBiotype
ENSMUSG00000022315 (Slc30a8)
solute carrier family 30 (zinc transporter), member 8 		ENSMUST00000037240 (Slc30a8-001) 52295553-52335798 protein_coding
ENSMUSG00000057262 (Gm10020)
predicted pseudogene 10020 		ENSMUST00000081993 (Gm10020-201) 52477614-52478228 protein_coding
ENSMUSG00000068522 (Aard)
alanine and arginine rich domain containing protein 		ENSMUST00000090025 (Aard-001) 52040107-52045722 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007ZT_0001ENSG00000164754ENST00000297338ENST00000517485ENST00000517749ENST00000518055ENST00000519469ENST00000519837ENST00000520992ENST00000522699ENST00000523547ENST00000523986ENSG00000205002ENST00000378279ENST00000523536ENSG00000240151ENST00000479724ENSG00000253271ENST00000522976ENSG00000253622ENST00000518439CIL_0007ZT_0002ENSMUSG00000022315ENSMUST00000037240ENSMUSG00000057262ENSMUST00000081993ENSMUSG00000068522ENSMUST00000090025
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007ZT_0001ENSG00000164754ENST00000297338ENST00000520992ENSG00000205002ENST00000378279ENST00000523536ENSG00000240151ENST00000479724ENSG00000253271ENST00000522976ENSG00000253622ENST00000518439CIL_0007ZT_0002ENSMUSG00000022315ENSMUST00000037240ENSMUSG00000057262ENSMUST00000081993ENSMUSG00000068522ENSMUST00000090025
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164754 ENST00000297338 N/A N/A N/A 18.267±8.52 17.862±10.14 8.021±0.00 7.907±4.55 9.509±0.00 8.649±0.74 20.181±6.04 10.686±0.00 14.322±0.00 N/A N/A
ENST00000517485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519837 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520992 N/A N/A N/A N/A N/A N/A 19.112±0.00 N/A N/A N/A N/A 81.787±0.00 N/A N/A
ENST00000522699 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000205002 ENST00000378279 0.068±0.00 0.299±0.00 0.084±0.00 0.173±0.00 0.400±0.30 0.353±0.00 0.085±0.00 0.177±0.00 0.208±0.15 0.263±0.06 0.035±0.00 0.097±0.05 0.299±0.18 15.027±9.28
ENST00000523536 N/A N/A N/A 0.363±0.00 N/A N/A N/A 0.169±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000240151 ENST00000479724 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.110±0.00
ENSG00000253271 ENST00000522976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.096±0.00
ENSG00000253622 ENST00000518439 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.054±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022315 ENSMUST00000037240 N/A N/A N/A 0.027±0.01 N/A 0.083±0.04 N/A 0.026±0.01 0.069±0.06 N/A N/A 0.038±0.03 0.003±0.00 0.067±0.03
ENSMUSG00000057262 ENSMUST00000081993 2.566±2.37 1.079±0.30 20.526±20.44 12.383±12.23 0.083±0.00 4.963±0.82 2.528±0.65 0.295±0.22 17.440±27.37 3.583±0.33 N/A 4.885±3.08 2.106±3.43 1.974±0.83
ENSMUSG00000068522 ENSMUST00000090025 7.346±6.88 0.222±0.12 36.797±5.33 1.384±0.73 0.270±0.10 2.824±1.16 0.124±0.07 0.135±0.07 1.423±0.34 14.329±2.17 0.056±0.02 14.450±6.58 4.550±3.65 74.870±36.95

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