C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TBC1 domain family, member 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000037337 Tbc1d19-201 ENSMUSG00000039178 10090 + 5:53809627-53904380 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037337
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037337 4.718±2.26 4.714±1.99 6.834±0.70 7.943±3.50 3.850±1.11 2.435±0.72 3.105±0.83 7.647±1.99 1.147±0.50 6.717±0.59 2.995±0.62 5.227±1.76 1.842±0.70 6.588±3.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TQ CIL_0002TQ_0003 CGP 5:53698485-53904380
CIL_0002TT CIL_0002TT_0003 CGP 5:53809627-54121057

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005097 IEA Rab GTPase activator activity
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0032851 IEA positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264866 TBC1D19-001 protein_coding Homo_sapiens 0 2575
ENST00000502873 TBC1D19-002 retained_intron Homo_sapiens 0 2189
ENST00000504442 TBC1D19-006 processed_transcript Homo_sapiens 0 811
ENST00000505206 TBC1D19-007 protein_coding Homo_sapiens 0 767
ENST00000511789 TBC1D19-003 protein_coding Homo_sapiens 0 1792
ENST00000512840 TBC1D19-004 protein_coding Homo_sapiens 0 1092
ENST00000513455 TBC1D19-005 protein_coding Homo_sapiens 0 248
ENST00000513596 TBC1D19-008 protein_coding Homo_sapiens 0 479
ENST00000515568 TBC1D19-009 processed_transcript Homo_sapiens 0 713

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