C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: forkhead box H1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000037824 Foxh1-201 ENSMUSG00000033837 10090 - 15:76668284-76669948 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037824
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037824 0.035±0.01 0.026±0.00 0.041±0.02 0.155±0.10 0.037±0.01 0.052±0.02 0.051±0.03 0.646±0.54 0.021±0.00 0.029±0.00 0.074±0.01 0.110±0.08 7.518±0.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SS CIL_0007SS_0002 VISTA 15:76102685-76704351
CIL_0000W1 CIL_0000W1_0002 CGP 15:76660641-76669948
CIL_00064G CIL_00064G_0003 CGP 15:76668284-76694919

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IGI negative regulation of transcription from RNA polymerase II promoter
GO:0000790 IEA nuclear chromatin
GO:0001104 IMP RNA polymerase II transcription cofactor activity
GO:0001190 IMP RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription
GO:0001205 IDA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001947 IMP heart looping
GO:0003139 IMP secondary heart field specification
GO:0003151 IMP outflow tract morphogenesis
GO:0003215 IMP cardiac right ventricle morphogenesis
GO:0003222 IMP ventricular trabecula myocardium morphogenesis
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005667 IDA transcription factor complex
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0006366 IMP transcription from RNA polymerase II promoter
GO:0007179 IDA transforming growth factor beta receptor signaling pathway
GO:0007368 IMP determination of left/right symmetry
GO:0009952 IMP anterior/posterior pattern specification
GO:0019904 IEA protein domain specific binding
GO:0032444 IDA activin responsive factor complex
GO:0033147 IEA negative regulation of intracellular estrogen receptor signaling pathway
GO:0035054 IMP embryonic heart tube anterior/posterior pattern specification
GO:0035909 IMP aorta morphogenesis
GO:0043425 IEA bHLH transcription factor binding
GO:0043565 IDA sequence-specific DNA binding
GO:0044212 IDA transcription regulatory region DNA binding
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046332 IPI SMAD binding
GO:0048318 IMP axial mesoderm development
GO:0050681 IEA androgen receptor binding
GO:0060766 IEA negative regulation of androgen receptor signaling pathway
GO:0070410 IEA co-SMAD binding
GO:0070412 IDA R-SMAD binding
GO:2000824 IEA negative regulation of androgen receptor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000377317 FOXH1-001 protein_coding Homo_sapiens 0 824
ENST00000525197 FOXH1-003 processed_transcript Homo_sapiens 0 289

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