C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: forkhead box H1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000377317 FOXH1-001 ENSG00000160973 9606 - 8:144473412-144476335 protein_coding

Homo sapiens EnsemblGRCh38

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Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderKidneyLiverOvaryTestisENST00000377317
Transcript ID Adrenal Bladder Kidney Liver Ovary Testis
ENST00000377317 0.727±0.00 0.213±0.00 0.033±0.00 0.142±0.00 5.816±4.96 6.555±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SS CIL_0007SS_0001 VISTA 8:143880613-144482307
CIL_0005WV CIL_0005WV_0001 CGP 8:144449582-144474202
CIL_0000W1 CIL_0000W1_0001 CGP 8:144466043-144476335
CIL_00064G CIL_00064G_0002 CGP 8:144473412-144502121

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0000790 IDA nuclear chromatin
GO:0001104 IEA RNA polymerase II transcription cofactor activity
GO:0001190 IEA RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription
GO:0001205 IEA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001947 IEA heart looping
GO:0003139 IEA secondary heart field specification
GO:0003151 IEA outflow tract morphogenesis
GO:0003215 IEA cardiac right ventricle morphogenesis
GO:0003222 IEA ventricular trabecula myocardium morphogenesis
GO:0003677 IDA DNA binding
GO:0003700 NAS:IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005667 IDA transcription factor complex
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0007179 ISS transforming growth factor beta receptor signaling pathway
GO:0007368 IEA determination of left/right symmetry
GO:0009952 IEA anterior/posterior pattern specification
GO:0019904 IPI protein domain specific binding
GO:0032444 IDA activin responsive factor complex
GO:0033147 IDA negative regulation of intracellular estrogen receptor signaling pathway
GO:0035054 IEA embryonic heart tube anterior/posterior pattern specification
GO:0035326 IC enhancer binding
GO:0035909 IEA aorta morphogenesis
GO:0043425 IPI bHLH transcription factor binding
GO:0043565 IDA:IEA sequence-specific DNA binding
GO:0044212 ISS transcription regulatory region DNA binding
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046332 IPI SMAD binding
GO:0048318 IEA axial mesoderm development
GO:0050681 IPI androgen receptor binding
GO:0060766 IDA negative regulation of androgen receptor signaling pathway
GO:0070410 IMP co-SMAD binding
GO:0070412 IMP R-SMAD binding
GO:1900164 NAS nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry
GO:2000824 IDA negative regulation of androgen receptor activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037824 Foxh1-201 protein_coding Mus_musculus 0 824

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