C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: exonuclease 3'-5' domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038185 Exd2-201 ENSMUSG00000032705 10090 + 12:80463095-80498135 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038185
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038185 2.941±1.18 4.059±1.98 5.367±0.12 10.312±2.64 2.083±1.06 2.688±1.77 2.478±0.74 2.994±0.40 2.268±0.93 5.247±0.99 9.031±2.70 5.601±2.93 3.227±0.82 8.500±2.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002CH CIL_0002CH_0002 CGP 12:80335847-80498135
CIL_0002CI CIL_0002CI_0002 CGP 12:80463095-80603896

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008408 IEA 3'-5' exonuclease activity
GO:0090305 IEA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000312994 EXD2-201 protein_coding Homo_sapiens 0 1927
ENST00000409014 EXD2-001 protein_coding Homo_sapiens 0 1766
ENST00000409018 EXD2-002 protein_coding Homo_sapiens 0 1927
ENST00000409242 EXD2-006 protein_coding Homo_sapiens 0 1927
ENST00000409675 EXD2-007 protein_coding Homo_sapiens 0 1768
ENST00000409949 EXD2-005 protein_coding Homo_sapiens 0 1927
ENST00000413191 EXD2-003 protein_coding Homo_sapiens 0 411
ENST00000465286 EXD2-012 retained_intron Homo_sapiens 0 285
ENST00000489133 EXD2-011 processed_transcript Homo_sapiens 0 405
ENST00000492815 EXD2-004 processed_transcript Homo_sapiens 0 1258
ENST00000494629 EXD2-010 processed_transcript Homo_sapiens 0 486

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