C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: budding uninhibited by benzimidazoles 1 homolog, beta (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038341 Bub1b-001 ENSMUSG00000040084 10090 + 2:118598211-118641591 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038341
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038341 2.962±1.20 0.771±0.21 0.973±0.00 5.953±4.81 1.152±0.40 3.173±1.01 0.229±0.10 0.330±0.03 13.035±13.55 0.799±0.50 0.214±0.09 8.776±2.51 11.107±7.49 12.169±2.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W0 CIL_0008W0_0002 VISTA 2:118232227-118834856
CIL_00070K CIL_00070K_0002 CGP 2:118528757-118641591
CIL_0005IH CIL_0005IH_0003 CGP 2:118598211-118698020

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000776 IDA kinetochore
GO:0000777 IEA condensed chromosome kinetochore
GO:0000778 IDA condensed nuclear chromosome kinetochore
GO:0000940 IDA condensed chromosome outer kinetochore
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0006468 IEA protein phosphorylation
GO:0006915 IEA apoptotic process
GO:0007091 IGI metaphase/anaphase transition of mitotic cell cycle
GO:0034501 IEA protein localization to kinetochore
GO:0048471 IEA perinuclear region of cytoplasm
GO:0071459 IMP protein localization to chromosome, centromeric region

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000287598 BUB1B-001 protein_coding Homo_sapiens 0 2342
ENST00000412359 BUB1B-003 protein_coding Homo_sapiens 0 2148
ENST00000441369 PAK6-201 protein_coding Homo_sapiens 0 202
ENST00000453867 PAK6-202 protein_coding Homo_sapiens 0 202
ENST00000558151 BUB1B-010 retained_intron Homo_sapiens 0 401
ENST00000558658 PAK6-001 nonsense_mediated_decay Homo_sapiens 2e-23 115
ENST00000558965 PAK6-003 retained_intron Homo_sapiens 0 202
ENST00000559435 PAK6-004 nonsense_mediated_decay Homo_sapiens 0 235
ENST00000559936 PAK6-002 retained_intron Homo_sapiens 0 202

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