C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: p21 protein (Cdc42/Rac)-activated kinase 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000558658 PAK6-001 ENSG00000259288 9606 + 15:40217587-40276387 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverENST00000558658
Transcript ID Brain Heart Liver
ENST00000558658 1.124±0.00 0.038±0.00 0.020±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W0 CIL_0008W0_0001 VISTA 15:39791359-40393937
CIL_00070K CIL_00070K_0001 CGP 15:40087890-40221136
CIL_0005IH CIL_0005IH_0002 CGP 15:40161023-40277486

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099557 Pak6-001 protein_coding Mus_musculus 0 2680
ENSMUST00000110853 Pak6-002 protein_coding Mus_musculus 0 2627
ENSMUST00000132577 Pak6-003 retained_intron Mus_musculus 0 1783
ENSMUST00000038341 Bub1b-001 protein_coding Mus_musculus 2e-23 115

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