C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA A230046K03 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038388 A230046K03Rik-201 ENSMUSG00000034560 10090 + 10:83543941-83596469 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038388
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038388 1.775±0.74 2.052±0.19 5.609±0.21 5.012±0.63 1.539±0.68 1.374±0.43 0.803±0.35 2.335±0.79 2.210±0.86 3.580±0.51 1.437±0.41 3.003±2.27 6.921±2.22 0.568±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004GA CIL_0004GA_0002 CGP 10:83487450-83596469
CIL_0004G8 CIL_0004G8_0002 CGP 10:83543941-83648738

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005768 IDA endosome
GO:0016197 IMP endosomal transport
GO:0071203 ISS WASH complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000088315 si:dkey-23p11.2-001 protein_coding Danio_rerio 0 1495
ENST00000311317 KIAA1033-002 retained_intron Homo_sapiens 0 3428
ENST00000332180 KIAA1033-001 protein_coding Homo_sapiens 0 4739
ENST00000547404 KIAA1033-012 nonsense_mediated_decay Homo_sapiens 0 828
ENST00000548195 KIAA1033-004 protein_coding Homo_sapiens 0 579
ENST00000550053 KIAA1033-003 nonsense_mediated_decay Homo_sapiens 0 4682
ENST00000550786 KIAA1033-010 retained_intron Homo_sapiens 0 682
ENST00000551224 KIAA1033-009 protein_coding Homo_sapiens 0 466
ENST00000551290 KIAA1033-008 processed_transcript Homo_sapiens 0 198
ENST00000552203 KIAA1033-011 protein_coding Homo_sapiens 0 196
ENST00000620430 KIAA1033-201 protein_coding Homo_sapiens 0 4724

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