C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004GA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000136010-ENSG00000136051 CGP 9606 12:105019784-105169134
GeneTranscriptPositionBiotype
ENSG00000136010 (ALDH1L2)
aldehyde dehydrogenase 1 family, member L2 		ENST00000258494 (ALDH1L2-001) 105019790-105084577 protein_coding
ENST00000548418 (ALDH1L2-005) 105030070-105031935 protein_coding
ENST00000549335 (ALDH1L2-003) 105019784-105066605 retained_intron
ENST00000552270 (ALDH1L2-002) 105024424-105084458 nonsense_mediated_decay
ENST00000552427 (ALDH1L2-004) 105070520-105084444 retained_intron
ENSG00000136051 (KIAA1033)
KIAA1033 		ENST00000311317 (KIAA1033-002) 105107714-105147905 retained_intron
ENST00000332180 (KIAA1033-001) 105107714-105169134 protein_coding
ENST00000547171 (KIAA1033-013) 105162749-105164729 processed_transcript
ENST00000547404 (KIAA1033-012) 105107786-105126049 nonsense_mediated_decay
ENST00000548195 (KIAA1033-004) 105107324-105118516 protein_coding
ENST00000548534 (KIAA1033-006) 105144718-105147543 retained_intron
ENST00000550036 (KIAA1033-007) 105162791-105164633 retained_intron
ENST00000550053 (KIAA1033-003) 105107715-105169130 nonsense_mediated_decay
ENST00000550613 (KIAA1033-005) 105144449-105146494 retained_intron
ENST00000550786 (KIAA1033-010) 105149474-105160094 retained_intron
ENST00000551224 (KIAA1033-009) 105156507-105162802 protein_coding
ENST00000551290 (KIAA1033-008) 105156615-105162790 processed_transcript
ENST00000552203 (KIAA1033-011) 105152346-105157322 protein_coding
ENST00000620430 (KIAA1033-201) 105107714-105169126 protein_coding
ENSG00000151131 (C12orf45)
chromosome 12 open reading frame 45 		ENST00000280749 (C12orf45-002) 104986339-104994720 protein_coding
ENST00000548583 (C12orf45-003) 104994492-105049737 processed_transcript
ENST00000552951 (C12orf45-001) 104986310-104995226 protein_coding
ENST00000622317 (C12orf45-201) 104986337-104994712 protein_coding
ENSG00000257999 (RP11-61E11.2)
 ENST00000550088 (RP11-61E11.2-001) 105102472-105107179 antisense
CIL_0004GA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020256-ENSMUSG00000034560 CGP 10090 10:83487450-83596469
GeneTranscriptPositionBiotype
ENSMUSG00000020256 (Aldh1l2)
aldehyde dehydrogenase 1 family, member L2 		ENSMUST00000020497 (Aldh1l2-001) 83487450-83534140 protein_coding
ENSMUST00000125193 (Aldh1l2-006) 83503992-83513720 processed_transcript
ENSMUST00000138858 (Aldh1l2-003) 83494742-83534081 retained_intron
ENSMUST00000141184 (Aldh1l2-004) 83494740-83497502 processed_transcript
ENSMUST00000143793 (Aldh1l2-005) 83499829-83508120 processed_transcript
ENSMUST00000146640 (Aldh1l2-002) 83489429-83533395 protein_coding
ENSMUST00000147381 (Aldh1l2-007) 83493337-83496017 processed_transcript
ENSMUSG00000034560 (A230046K03Rik)
RIKEN cDNA A230046K03 gene 		ENSMUST00000038388 (A230046K03Rik-201) 83543941-83596469 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004GA_0001ENSG00000136010ENST00000258494ENST00000548418ENST00000549335ENST00000552270ENST00000552427ENSG00000136051ENST00000311317ENST00000332180ENST00000547171ENST00000547404ENST00000548195ENST00000548534ENST00000550036ENST00000550053ENST00000550613ENST00000550786ENST00000551224ENST00000551290ENST00000552203ENST00000620430ENSG00000151131ENST00000280749ENST00000548583ENST00000552951ENST00000622317ENSG00000257999ENST00000550088CIL_0004GA_0002ENSMUSG00000020256ENSMUST00000020497ENSMUST00000125193ENSMUST00000138858ENSMUST00000141184ENSMUST00000143793ENSMUST00000146640ENSMUST00000147381ENSMUSG00000034560ENSMUST00000038388
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004GA_0001ENSG00000136010ENST00000258494ENST00000549335ENST00000552270ENSG00000136051ENST00000311317ENST00000332180ENST00000550053ENST00000620430ENSG00000151131ENST00000280749ENST00000552951ENST00000622317ENSG00000257999ENST00000550088CIL_0004GA_0002ENSMUSG00000020256ENSMUST00000020497ENSMUST00000125193ENSMUST00000138858ENSMUST00000141184ENSMUST00000146640ENSMUSG00000034560ENSMUST00000038388
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136010 ENST00000258494 0.850±0.00 1.030±0.00 0.067±0.00 0.548±0.00 0.518±0.15 0.279±0.00 0.362±0.19 0.263±0.00 0.366±0.31 0.318±0.08 0.250±0.11 0.160±0.05 0.141±0.00 0.481±0.00
ENST00000548418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549335 N/A N/A N/A 0.132±0.04 N/A 0.444±0.00 N/A N/A N/A 0.177±0.00 N/A 0.279±0.08 0.210±0.00 0.760±0.50
ENST00000552270 N/A N/A 0.028±0.00 N/A N/A N/A 0.139±0.00 N/A N/A N/A 0.100±0.00 N/A N/A N/A
ENST00000552427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000136051 ENST00000311317 N/A N/A N/A 1.510±0.00 N/A N/A N/A N/A 4.272±0.00 N/A N/A 4.257±0.00 N/A N/A
ENST00000332180 4.284±0.00 4.681±0.00 3.026±0.00 4.301±0.11 5.395±1.49 4.783±1.91 2.903±0.68 1.814±0.93 4.835±2.25 7.197±5.42 2.874±0.00 4.587±1.64 4.001±1.93 3.254±0.56
ENST00000547171 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548195 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550053 N/A 1.547±0.00 N/A N/A 2.902±0.00 N/A 0.623±0.00 2.802±0.00 N/A 0.528±0.00 N/A N/A N/A N/A
ENST00000550613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551224 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551290 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552203 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620430 0.735±0.00 N/A N/A N/A N/A N/A N/A 1.032±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000151131 ENST00000280749 N/A N/A 3.270±0.00 N/A N/A N/A N/A N/A N/A 0.978±0.00 N/A N/A N/A N/A
ENST00000548583 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552951 N/A N/A N/A 0.624±0.35 0.506±0.00 N/A 0.418±0.00 N/A 0.903±0.00 0.759±0.00 N/A 1.281±0.00 N/A N/A
ENST00000622317 6.484±0.00 14.614±0.00 0.763±0.00 3.409±0.60 5.228±3.50 5.804±2.79 1.704±0.71 2.213±1.20 4.029±3.18 3.226±2.04 3.264±0.00 12.785±7.45 8.002±0.88 9.040±1.26
ENSG00000257999 ENST00000550088 0.069±0.00 0.084±0.00 N/A 0.101±0.00 N/A N/A N/A N/A 0.085±0.00 0.083±0.00 N/A 0.085±0.04 N/A 0.549±0.44
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020256 ENSMUST00000020497 0.940±0.65 0.240±0.10 1.043±0.05 7.186±0.95 0.424±0.15 0.521±0.16 1.396±0.28 0.423±0.20 0.320±0.55 0.315±0.05 0.801±0.08 0.544±0.19 0.394±0.21 N/A
ENSMUST00000125193 N/A N/A N/A N/A N/A N/A N/A N/A 0.135±0.00 N/A N/A N/A N/A 0.411±0.00
ENSMUST00000138858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.112±0.01
ENSMUST00000141184 N/A N/A N/A N/A N/A N/A N/A N/A 0.042±0.01 N/A N/A N/A N/A N/A
ENSMUST00000143793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146640 N/A N/A N/A N/A N/A N/A N/A N/A 0.023±0.00 N/A N/A N/A N/A N/A
ENSMUST00000147381 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000034560 ENSMUST00000038388 1.775±0.74 2.052±0.19 5.609±0.21 5.012±0.63 1.539±0.68 1.374±0.43 0.803±0.35 2.335±0.79 2.210±0.86 3.580±0.51 1.437±0.41 3.003±2.27 6.921±2.22 0.568±0.21

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