C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: poly (ADP-ribose) polymerase family, member 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038398 Parp12-001 ENSMUSG00000038507 10090 - 6:39086410-39118349 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038398
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038398 17.548±5.01 24.419±5.12 14.489±2.71 1.403±0.09 16.258±4.14 41.926±4.79 6.068±1.15 8.200±1.01 12.000±5.85 27.822±4.03 1.406±0.28 21.732±8.33 4.114±1.24 7.787±3.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000309 CIL_000309_0003 CGP 6:38875404-39118349
CIL_0008ZU CIL_0008ZU_0002 VISTA 6:38939568-39543498
CIL_00030A CIL_00030A_0002 CGP 6:39086410-39206789

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003950 IEA NAD+ ADP-ribosyltransferase activity
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0044822 IEA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263549 PARP12-001 protein_coding Homo_sapiens 0 1832
ENST00000470515 PARP12-009 processed_transcript Homo_sapiens 0 318
ENST00000473341 PARP12-002 nonsense_mediated_decay Homo_sapiens 0 1011
ENST00000484111 PARP12-013 protein_coding Homo_sapiens 0 193
ENST00000488726 PARP12-003 retained_intron Homo_sapiens 0 1474
ENST00000489383 PARP12-012 retained_intron Homo_sapiens 0 302
ENST00000489809 PARP12-006 protein_coding Homo_sapiens 0 414
ENST00000491598 PARP12-007 nonsense_mediated_decay Homo_sapiens 0 414
ENST00000493262 PARP12-008 retained_intron Homo_sapiens 0 359
ENST00000496624 PARP12-011 retained_intron Homo_sapiens 0 368

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