C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00030A_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000059378-ENSG00000006459 CGP 9606 7:140023744-140177035
GeneTranscriptPositionBiotype
ENSG00000006459 (KDM7A)
lysine (K)-specific demethylase 7A 		ENST00000397560 (KDM7A-001) 140084746-140177035 protein_coding
ENST00000472616 (KDM7A-002) 140084855-140119142 nonsense_mediated_decay
ENST00000478996 (KDM7A-003) 140090903-140092141 retained_intron
ENSG00000059378 (PARP12)
poly (ADP-ribose) polymerase family, member 12 		ENST00000263549 (PARP12-001) 140023744-140063721 protein_coding
ENST00000466597 (PARP12-010) 140027276-140034736 retained_intron
ENST00000467638 (PARP12-005) 140057407-140062551 retained_intron
ENST00000470515 (PARP12-009) 140033842-140041728 processed_transcript
ENST00000473341 (PARP12-002) 140023749-140062933 nonsense_mediated_decay
ENST00000484111 (PARP12-013) 140025243-140027318 protein_coding
ENST00000488726 (PARP12-003) 140023786-140057309 retained_intron
ENST00000489383 (PARP12-012) 140026204-140027667 retained_intron
ENST00000489809 (PARP12-006) 140024534-140056991 protein_coding
ENST00000491598 (PARP12-007) 140024581-140054763 nonsense_mediated_decay
ENST00000493262 (PARP12-008) 140041379-140054722 retained_intron
ENST00000496624 (PARP12-011) 140026196-140029142 retained_intron
ENSG00000251728 (Y_RNA)
Y RNA 		ENST00000515919 (Y_RNA.1-859) 140094697-140094792 misc_RNA
CIL_00030A_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038507-ENSMUSG00000042599 CGP 10090 6:39086410-39206789
GeneTranscriptPositionBiotype
ENSMUSG00000038507 (Parp12)
poly (ADP-ribose) polymerase family, member 12 		ENSMUST00000038398 (Parp12-001) 39086410-39118349 protein_coding
ENSMUST00000129916 (Parp12-002) 39089016-39091093 retained_intron
ENSMUSG00000042599 (Kdm7a)
lysine (K)-specific demethylase 7A 		ENSMUST00000002305 (Kdm7a-001) 39136623-39206789 protein_coding
ENSMUST00000127036 (Kdm7a-002) 39142110-39154682 processed_transcript
ENSMUSG00000073144 (4930599N23Rik)
RIKEN cDNA 4930599N23 gene 		ENSMUST00000101511 (4930599N23Rik-201) 39118408-39119955 antisense
ENSMUST00000146981 (4930599N23Rik-001) 39118473-39148312 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00030A_0001ENSG00000006459ENST00000397560ENST00000472616ENST00000478996ENSG00000059378ENST00000263549ENST00000466597ENST00000467638ENST00000470515ENST00000473341ENST00000484111ENST00000488726ENST00000489383ENST00000489809ENST00000491598ENST00000493262ENST00000496624ENSG00000251728ENST00000515919CIL_00030A_0002ENSMUSG00000038507ENSMUST00000038398ENSMUST00000129916ENSMUSG00000042599ENSMUST00000002305ENSMUST00000127036ENSMUSG00000073144ENSMUST00000101511ENSMUST00000146981
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00030A_0001ENSG00000006459ENST00000397560ENST00000472616ENSG00000059378ENST00000263549ENST00000470515ENST00000473341ENST00000488726ENST00000489809ENST00000491598ENST00000493262ENST00000496624ENSG00000251728ENST00000515919CIL_00030A_0002ENSMUSG00000038507ENSMUST00000038398ENSMUST00000129916ENSMUSG00000042599ENSMUST00000002305ENSMUST00000127036ENSMUSG00000073144ENSMUST00000101511
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000006459 ENST00000397560 3.628±0.00 N/A 1.760±0.00 1.302±0.49 3.628±2.32 3.224±1.37 1.718±0.14 0.752±0.20 1.621±0.99 3.089±1.77 3.819±2.56 1.705±1.46 1.205±0.15 5.658±2.86
ENST00000472616 1.195±0.00 N/A N/A 0.550±0.00 0.740±0.00 0.576±0.00 N/A 0.665±0.00 0.369±0.00 2.420±0.00 4.837±0.00 0.848±0.70 0.953±0.55 0.923±0.00
ENST00000478996 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000059378 ENST00000263549 N/A N/A N/A 0.376±0.13 2.387±0.00 N/A 0.518±0.00 N/A N/A N/A N/A 1.673±0.17 N/A 4.905±2.74
ENST00000466597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467638 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.598±0.00 N/A N/A N/A
ENST00000473341 2.272±0.00 3.714±0.00 N/A 0.415±0.00 1.954±0.00 1.310±0.00 1.739±1.40 4.459±0.00 2.056±1.19 3.376±0.00 1.091±1.02 4.724±2.85 5.080±0.13 2.363±0.00
ENST00000484111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488726 0.933±0.00 5.133±0.00 N/A N/A 2.101±0.00 2.247±0.00 N/A 2.733±0.00 0.719±0.14 2.904±1.20 0.653±0.00 3.953±1.25 4.148±0.92 1.864±0.00
ENST00000489383 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489809 N/A N/A N/A N/A N/A 3.710±0.00 1.017±0.00 N/A 1.154±0.00 N/A N/A N/A N/A N/A
ENST00000491598 N/A N/A N/A N/A N/A N/A N/A 2.189±0.00 3.839±0.00 N/A 1.958±0.00 N/A N/A N/A
ENST00000493262 N/A N/A 0.881±0.00 N/A N/A N/A N/A N/A N/A N/A 2.238±0.00 N/A N/A N/A
ENST00000496624 N/A N/A N/A N/A N/A N/A N/A N/A 1.526±0.00 7.315±0.00 N/A N/A N/A 7.569±0.00
ENSG00000251728 ENST00000515919 1.350±0.00 N/A N/A N/A N/A 0.496±0.00 N/A N/A N/A 1.140±0.00 N/A N/A N/A 0.930±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038507 ENSMUST00000038398 17.548±5.01 24.419±5.12 14.489±2.71 1.403±0.09 16.258±4.14 41.926±4.79 6.068±1.15 8.200±1.01 12.000±5.85 27.822±4.03 1.406±0.28 21.732±8.33 4.114±1.24 7.787±3.55
ENSMUST00000129916 N/A N/A N/A N/A 4.864±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000042599 ENSMUST00000002305 4.104±1.52 3.075±0.12 2.268±0.01 2.040±0.79 3.940±1.10 3.292±0.33 1.835±0.27 1.996±0.56 2.924±1.95 4.406±1.09 2.827±0.94 6.157±1.76 0.685±0.33 2.917±0.94
ENSMUST00000127036 N/A N/A N/A 2.631±0.00 N/A N/A N/A N/A N/A N/A N/A 2.193±0.00 0.220±0.00 3.424±0.00
ENSMUSG00000073144 ENSMUST00000101511 N/A 3.479±0.32 N/A N/A 3.136±0.25 N/A N/A N/A N/A 3.835±0.00 N/A 3.618±0.67 N/A 3.878±0.26
ENSMUST00000146981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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