C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chemokine (C-X-C motif) ligand 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038816 Cxcl10-001 ENSMUSG00000034855 10090 - 5:92346638-92348882 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungOvaryPlacentaENSMUST00000038816
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Ovary Placenta
ENSMUST00000038816 8.662±0.94 1.100±0.25 0.232±0.08 6.575±0.80 1.361±0.44 6.725±2.12 7.260±3.72 2.124±0.00 2.410±1.02 0.558±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071M CIL_00071M_0002 CGP 5:92321331-92414628
CIL_0008VL CIL_0008VL_0002 VISTA 5:92327753-92928377
CIL_00071H CIL_00071H_0002 CGP 5:92331827-92414628

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002690 IEA positive regulation of leukocyte chemotaxis
GO:0005515 IEA protein binding
GO:0005615 IDA extracellular space
GO:0006935 ISS chemotaxis
GO:0006954 IEA inflammatory response
GO:0007165 IEA signal transduction
GO:0007186 ISS G-protein coupled receptor signaling pathway
GO:0008009 ISS chemokine activity
GO:0008201 IEA heparin binding
GO:0008284 IEA positive regulation of cell proliferation
GO:0009306 IEA protein secretion
GO:0009409 IEA response to cold
GO:0009615 IEA response to virus
GO:0009897 IDA external side of plasma membrane
GO:0010332 IEA response to gamma radiation
GO:0010818 IEA T cell chemotaxis
GO:0010996 IEA response to auditory stimulus
GO:0016525 IEA negative regulation of angiogenesis
GO:0030335 IEA positive regulation of cell migration
GO:0030816 ISS positive regulation of cAMP metabolic process
GO:0032496 IEA response to lipopolysaccharide
GO:0033280 IEA response to vitamin D
GO:0034605 IEA cellular response to heat
GO:0042127 ISS regulation of cell proliferation
GO:0043950 ISS positive regulation of cAMP-mediated signaling
GO:0045662 IMP negative regulation of myoblast differentiation
GO:0048248 ISS CXCR3 chemokine receptor binding
GO:0051281 ISS positive regulation of release of sequestered calcium ion into cytosol
GO:0051607 IDA defense response to virus
GO:0070098 IEA chemokine-mediated signaling pathway
GO:0071222 ISO cellular response to lipopolysaccharide
GO:1901740 IMP negative regulation of myoblast fusion
GO:2000406 ISO positive regulation of T cell migration

Homologs

No Homologs available.

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