C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1110059E24 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038830 1110059E24Rik-001 ENSMUSG00000035171 10090 - 19:21597312-21652976 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038830
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038830 3.957±1.49 1.130±0.54 13.571±0.01 8.018±4.78 3.024±0.66 4.409±0.25 2.623±0.63 3.409±0.49 4.257±1.14 4.223±1.38 2.344±0.27 3.329±3.82 7.145±4.05 4.520±1.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000053 CIL_000053_0002 CGP 19:21581202-21685637

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000334731 C9orf85-004 protein_coding Homo_sapiens 0 501
ENST00000377027 C9orf85-005 nonsense_mediated_decay Homo_sapiens 0 364
ENST00000377031 C9orf85-003 protein_coding Homo_sapiens 0 460
ENST00000473252 C9orf85-006 nonsense_mediated_decay Homo_sapiens 0 326
ENST00000486911 C9orf85-002 protein_coding Homo_sapiens 0 300

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