C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | clavesin 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000038841  |
Clvs1-001 |
ENSMUSG00000041216 |
10090 | + |
4:9269317-9451691  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0003FX | CIL_0003FX_0002 | CGP | 4:8690406-9451691 |
| CIL_0003GG | CIL_0003GG_0002 | CGP | 4:9269293-9669344 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005215 | IEA | transporter activity |
| GO:0005768 | ISS | endosome |
| GO:0005802 | ISS | trans-Golgi network |
| GO:0006810 | IEA | transport |
| GO:0007040 | ISS | lysosome organization |
| GO:0016020 | IEA | membrane |
| GO:0030136 | ISS | clathrin-coated vesicle |
| GO:0080025 | ISS | phosphatidylinositol-3,5-bisphosphate binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000325897
|
CLVS1-001 | protein_coding | Homo_sapiens | 0 | 1578 |
|
ENST00000518592
|
CLVS1-004 | protein_coding | Homo_sapiens | 0 | 798 |
|
ENST00000518858
|
CLVS1-006 | processed_transcript | Homo_sapiens | 3e-37 | 161 |
|
ENST00000519846
|
CLVS1-003 | protein_coding | Homo_sapiens | 0 | 1399 |
|
ENST00000520712
|
CLVS1-007 | protein_coding | Homo_sapiens | 0 | 492 |
|
ENST00000521189
|
CLVS1-002 | retained_intron | Homo_sapiens | 0 | 972 |
|
ENST00000523868
|
CLVS1-005 | protein_coding | Homo_sapiens | 0 | 200 |
