C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PDZ domain containing 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038901 Pdzd7-002 ENSMUSG00000074818 10090 - 19:45026906-45030015 processed_transcript

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleOvaryENSMUST00000038901
Transcript ID Muscle Ovary
ENSMUST00000038901 3.021±0.09 6.691±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BD CIL_0008BD_0002 VISTA 19:44496521-45098014
CIL_0007U1 CIL_0007U1_0002 VISTA 19:44501251-45102539
CIL_000940 CIL_000940_0002 VISTA 19:44925545-45526320
CIL_0005ND CIL_0005ND_0002 CGP 19:45006558-45027104
CIL_0001C9 CIL_0001C9_0003 CGP 19:45015176-45046614
CIL_0005NG CIL_0005NG_0002 CGP 19:45026906-45056383

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000370220 LZTS2-001 protein_coding Homo_sapiens 6e-37 161
ENST00000370223 LZTS2-002 protein_coding Homo_sapiens 3e-37 161
ENST00000474125 PDZD7-004 nonsense_mediated_decay Homo_sapiens 0 335
ENST00000619208 PDZD7-201 protein_coding Homo_sapiens 0 335

Loading